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Reorg step 1: consolidate repo under core/, drop the mafiabot label
Mechanical structure-only pass (no document/guide content edits): - Move src/ichor, src/endocrine, and docs/ into core/; the old top-level mafiabot_core/ becomes core/. Everything now lives under a single core/ root. - Drop the "mafiabot" label from the Ada/Alire crate: core.gpr (project Core), alire.toml name = "core"; the generated *_config.* regenerate as core_config.*. - Repoint build-critical wiring only: - .claude/skills/run-sica-fondt/smoke.sh (ponyc + Ada + COBOL paths) - core/src/endocrine R source()/runner paths and the test glob - .github/workflows/ci.yml (working-directory + gpr name) Verified green: smoke ALL GREEN (Pony Ichor, Ada core crate + tests, COBOL E1 vault); R endocrine 14/0; Octave ETR 26/0/1. Deferred (reserved for a less-ephemeral doc/guide pass): docmap.yaml, the guide files and nested AGENTS.md/README prose + now-stale relative links, SOUL.md, and the deeper ring/storage restructure. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_015hmgREHNsxYCuim33yUF2c
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Claude
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# Gen.03 — concentric bus topology *(DRAFT — captured live, correct freely)*
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Two rings around a membrane. Outer organs ride Ichor up to Ada; Ada is the
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gate and routes the inner bus; behind it the inner organs (Hermes among them).
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The world is outside; nothing reaches the inner ring without crossing Ada.
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```
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External (world: user / network)
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│
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▼ outer bus — ICHOR (Pony)
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┌─────────────────────────────────────────────────────────┐
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│ OUTER ORGANS │
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│ • stomach / economy organ (small-model operated; │
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│ digests external input → context) │
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│ • microagents │
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│ • SAE (sparse autoencoder) │
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│ • MoRAG = GoDAGRAG │
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│ (Graph of Directed Acyclic Graphs of RAGs) │
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└─────────────────────────────────────────────────────────┘
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│
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▼ ADA (D1) — the membrane / border (screens, provenance, rate)
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┌─────────────────────────────────────────────────────────┐
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│ INNER ORGANS inner-brain bus = ADA-routed │
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│ • soul (B2) │
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│ • metacog (C2) │
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│ • Hermes (the OpenHermes agent — a peer here) │
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│ • drive-box (A1) │
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│ • mini-rag (MUSCLE MEMORY — tool-shape recall, D3) │
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│ • COBOL invariant laws (E1 — the law vault) │
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└─────────────────────────────────────────────────────────┘
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```
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## Three different "memories" — do NOT conflate
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- **MoRAG = GoDAGRAG** — OUTER. Reads the **world** (the graph of DAGs of RAGs).
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- **mini-rag** — INNER. **Muscle memory.** Pre-motor: before an action reaches
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the actual hands (the real tools / effectors), mini-rag recalls the **right
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shape** for it — the tool schema (D3). HD associative recall of the learned
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form, like a hand pre-shaping its grip. It is **tool lookup**, not
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world-retrieval and not self-knowledge.
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- **E1 invariant laws** — INNER. The immutable laws the system must obey, held
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in COBOL vaults (the constitution). Not "ontology" — that was a bad paraphrase.
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## The deck (B1) — integers + a table
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- **Shuffle kernel:** 169 × 2 = **338 integers**, shuffled + randomized → pure
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RNG/permutation → **Fortran** (native to the Ada inner bus).
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- **Lookup table:** card meaning keyed by integer → **COBOL** indexed records.
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## Language map
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Two **distinct Fortran scripts** and (at least) two **distinct COBOL stores** —
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not shared modules.
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| Component | Language | Status |
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|---|---|---|
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| Ichor (outer bus) | Pony | built |
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| Ada (membrane + inner-bus router) | Ada/SPARK | decided |
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| deck shuffle — *Fortran script #1* | Fortran | decided |
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| mini-rag (muscle memory / tool-shape recall) — *Fortran script #2* | Fortran | decided |
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| deck lookup table — *COBOL store #1* | COBOL | decided |
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| tool-schema store (mini-rag reads this) — *COBOL store #2* | COBOL | decided |
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| COBOL invariant laws / E1 (the law vault, separate) | COBOL | given |
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| drive-box (A1) | R | existing |
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| MoRAG / GoDAGRAG (outer) | Haskell or Crystal | open |
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| Hermes | OpenHermes agent (external model) | given |
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## Corrections baked in (vs earlier wrong models)
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- Hermes is an inner organ on the inner bus — not external, not a separate core.
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- Ichor is the OUTER bus (organs → Ada), not the brain bus.
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- Inner bus is **Ada-routed**, not Pony.
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- **mini-rag = muscle memory / tool-shape recall (D3)** — it reads the
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**tool-schema** COBOL store, NOT the ontology, and is NOT the MoRAG.
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- MoRAG/GoDAGRAG (outer) ≠ mini-rag (inner).
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- The deck is integers + a table; no fancy ADT language needed.
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## Inner-bus Ada — Jorvik
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The inner-bus Ada runs the **Jorvik** profile (same `gnat.adc` hardening as the
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border: `No_Exceptions`, `SPARK_Mode`, `No_Implicit_Dynamic_Code`). Shape:
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**protected object = mailbox/sync** (short, non-blocking — Jorvik forbids
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blocking in a protected action), **tasks = workers** that call into the organs
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(Fortran/COBOL/R/model via native interop) and may block.
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## Open / to place
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- **COBOL inventory:** two lookup stores (deck table + tool-schema). Is the **E1
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invariant-law vault** a third COBOL store, or a different kind of COBOL
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structure that isn't a lookup "store"?
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- **MoRAG / GoDAGRAG language** (Haskell vs Crystal vs other).
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- Each outer organ's hand-off shape to Ada.
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- The stomach/economy organ's exact placement + which small model runs it.
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